Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | COO09_03055 | Not Available | - | 635567 - 636985 | 51914.6 |
| serine/threonine protein phosphatase | COO09_03060 | Not Available | + | 637213 - 638004 | 29235.8 |
| diguanylate cyclase | COO09_03065 | Not Available | + | 638086 - 640743 | 95561.8 |
| duf559 domain-containing protein | COO09_03070 | Not Available | - | 640805 - 641107 | 11470.9 |
| phosphoribosylformylglycinamidine synthase ii | COO09_03075 | Not Available | - | 641229 - 643421 | 76983.2 |
| cina family protein | COO09_03080 | Not Available | - | 643455 - 644003 | 18897.7 |
| hypothetical protein | COO09_03085 | Not Available | - | 643978 - 644382 | 15353.1 |
| hemerythrin | COO09_03090 | Not Available | - | 644455 - 644967 | 19176.8 |
| plasmid stabilization protein | COO09_03095 | Not Available | + | 645143 - 645436 | 10706.2 |
| hypothetical protein | COO09_03100 | Not Available | + | 645497 - 645868 | 12514.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.