Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | COO09_03005 | Not Available | - | 626380 - 626607 | 7560.98 |
| cysteine synthase a | COO09_03010 | Not Available | - | 626705 - 627703 | 34528.4 |
| dna-deoxyinosine glycosylase | COO09_03015 | Not Available | + | 627786 - 628304 | 18897.7 |
| hypothetical protein | COO09_03020 | Not Available | + | 628386 - 628766 | 12904.1 |
| cys-trna(pro)/cys-trna(cys) deacylase | COO09_03025 | Not Available | - | 628832 - 629305 | 16510.0 |
| slc13 family permease | COO09_03030 | Not Available | - | 629374 - 631152 | 62163.5 |
| hypothetical protein | COO09_03035 | Not Available | - | 631245 - 632441 | 42467.5 |
| phytanoyl-coa dioxygenase | COO09_03040 | Not Available | - | 632586 - 633611 | 38629.4 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | COO09_03045 | Not Available | - | 633622 - 634425 | 28524.3 |
| kpsf/gutq family sugar-phosphate isomerase | COO09_03050 | Not Available | - | 634440 - 635432 | 35117.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.