Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | COO09_02955 | Not Available | - | 614365 - 615525 | 41635.5 |
| cell division protein ftsw | COO09_02960 | Not Available | - | 615522 - 616742 | 43543.4 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | COO09_02965 | Not Available | - | 616739 - 618154 | 49871.3 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | COO09_02970 | Not Available | - | 618151 - 619221 | 38288.0 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | COO09_02975 | Not Available | - | 619209 - 620612 | 48569.9 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | COO09_02980 | Not Available | - | 620737 - 622164 | 49888.4 |
| penicillin-binding protein 2 | COO09_02985 | Not Available | - | 622151 - 623911 | 63293.2 |
| hypothetical protein | COO09_02990 | Not Available | - | 623908 - 624528 | 21986.2 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | COO09_02995 | Not Available | - | 624525 - 625493 | 34879.3 |
| division/cell wall cluster transcriptional repressor mraz | COO09_03000 | Not Available | - | 625490 - 626017 | 19350.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.