Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter permease lptg | COO09_02755 | Not Available | + | 574617 - 575711 | 38759.6 |
| fatty acid hydroxylase | COO09_02760 | Not Available | + | 575821 - 576585 | 29411.0 |
| n-acetyltransferase | COO09_02765 | Not Available | + | 576585 - 577733 | 42871.0 |
| lyse family translocator | COO09_02770 | Not Available | + | 577839 - 578471 | 23210.7 |
| duf1244 domain-containing protein | COO09_02775 | Not Available | + | 578484 - 578780 | 10952.9 |
| exodeoxyribonuclease iii | COO09_02780 | Not Available | - | 579027 - 579806 | 28413.6 |
| hypothetical protein | COO09_02785 | Not Available | + | 579784 - 579975 | 6995.65 |
| iron-sulfur cluster assembly accessory protein | COO09_02790 | Not Available | - | 580094 - 580417 | 10875.9 |
| m23 family peptidase | COO09_02795 | Not Available | - | 580500 - 581186 | 23954.4 |
| duf455 domain-containing protein | COO09_02800 | Not Available | - | 581251 - 582096 | 31021.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.