Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | COO09_02655 | Not Available | - | 556248 - 557846 | 56120.1 |
| cobyric acid synthase | COO09_02660 | Not Available | - | 557883 - 559340 | 50806.5 |
| Trna-ser | Not Available | Not Available | + | 559449 - 559538 | Not Available |
| dna-binding protein | COO09_02670 | Not Available | + | 559639 - 560055 | 15894.6 |
| 50s ribosomal protein l21 | COO09_02675 | Not Available | + | 560217 - 560579 | 12757.5 |
| 50s ribosomal protein l27 | COO09_02680 | Not Available | + | 560607 - 560876 | 9367.3 |
| n-acetyltransferase | COO09_02685 | Not Available | + | 561058 - 561630 | 20530.5 |
| tetr/acrr family transcriptional regulator | COO09_02690 | Not Available | + | 561914 - 562483 | 20898.7 |
| gtpase obge | COO09_02695 | Not Available | + | 562575 - 563618 | 36500.4 |
| glutamate 5-kinase | COO09_02700 | Not Available | + | 563719 - 564843 | 39067.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.