Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| orotate phosphoribosyltransferase | COO09_02605 | Not Available | - | 546914 - 547504 | 20903.6 |
| cytochrome c oxidase subunit ii | COO09_02610 | Not Available | + | 547696 - 548730 | 36504.2 |
| cytochrome c oxidase subunit i | COO09_02615 | Not Available | + | 548742 - 550433 | 62097.0 |
| protoheme ix farnesyltransferase | COO09_02620 | Not Available | + | 550514 - 551416 | 32044.2 |
| cytochrome c oxidase assembly protein | COO09_02625 | Not Available | + | 551532 - 552104 | 20627.0 |
| cytochrome c oxidase subunit 3 | COO09_02630 | Not Available | + | 552152 - 553018 | 31987.1 |
| duf983 domain-containing protein | COO09_02635 | Not Available | + | 553102 - 553476 | 13141.6 |
| surf1 family protein | COO09_02640 | Not Available | + | 553476 - 554099 | 22169.6 |
| udp-galactopyranose mutase | COO09_02645 | Not Available | + | 554027 - 555235 | 45242.4 |
| glycosyltransferase family 1 protein | COO09_02650 | Not Available | + | 555232 - 556335 | 41097.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.