Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysine--trna ligase | COO09_02555 | Not Available | + | 537334 - 538941 | 59581.0 |
| duf885 domain-containing protein | COO09_02560 | Not Available | - | 539200 - 541017 | 67302.6 |
| hypothetical protein | COO09_02565 | Not Available | - | 541131 - 541607 | 18712.1 |
| hypothetical protein | COO09_02570 | Not Available | - | 541947 - 542852 | 36399.6 |
| isoquinoline 1-oxidoreductase | COO09_02575 | Not Available | - | 542929 - 543483 | 19400.3 |
| 30s ribosomal protein s21 | COO09_02580 | Not Available | + | 543778 - 543984 | 8359.34 |
| peptidylprolyl isomerase | COO09_02585 | Not Available | + | 544061 - 544624 | 19524.9 |
| signal peptidase i | COO09_02590 | Not Available | - | 544879 - 545754 | 32186.7 |
| holo-acp synthase | COO09_02595 | Not Available | - | 545791 - 546192 | 14508.5 |
| pyridoxine 5'-phosphate synthase | COO09_02600 | Not Available | - | 546189 - 546917 | 26158.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.