Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | COO09_02455 | Not Available | + | 518700 - 519332 | 22426.9 |
| hypothetical protein | COO09_02460 | Not Available | - | 519340 - 520113 | 28214.4 |
| sulfite exporter taue/safe family protein | COO09_02465 | Not Available | - | 520230 - 521144 | 32154.9 |
| phosphoesterase | COO09_02470 | Not Available | + | 521335 - 521997 | 23803.7 |
| peptide-methionine (s)-s-oxide reductase | COO09_02475 | Not Available | - | 522045 - 522707 | 23781.3 |
| pyridoxal phosphate-dependent aminotransferase | COO09_02480 | Not Available | - | 522883 - 524085 | 42681.9 |
| aminotransferase | COO09_02485 | Not Available | - | 524161 - 524787 | 22898.5 |
| mbl fold metallo-hydrolase | COO09_02490 | Not Available | + | 524987 - 525655 | 23787.3 |
| gst-like protein | COO09_02495 | Not Available | - | 525677 - 526117 | 15587.8 |
| 50s ribosomal protein l32 | COO09_02500 | Not Available | + | 526281 - 526460 | 6689.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.