Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | COO09_02300 | Not Available | + | 492262 - 493092 | 28705.7 |
| hu family dna-binding protein | COO09_02310 | Not Available | - | 493511 - 493786 | 9239.1 |
| hlyc/corc family transporter | COO09_02315 | Not Available | - | 493984 - 495306 | 47515.8 |
| nucleoside deaminase | COO09_02320 | Not Available | - | 495360 - 495812 | 15912.1 |
| yqae/pmp3 family membrane protein | COO09_02325 | Not Available | - | 495846 - 495968 | 4415.71 |
| hypothetical protein | COO09_02330 | Not Available | - | 496051 - 496368 | 11154.3 |
| 50s ribosomal protein l28 | COO09_02335 | Not Available | + | 496520 - 496813 | 10683.0 |
| hypothetical protein | COO09_02340 | Not Available | - | 496935 - 497885 | 34997.9 |
| glycine zipper 2tm domain-containing protein | COO09_02345 | Not Available | + | 498098 - 498496 | 14021.4 |
| m23 family peptidase | COO09_02350 | Not Available | - | 498602 - 500149 | 54707.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.