Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | COO09_23905 | Not Available | - | 4996117 - 4997241 | 42058.6 |
| alpha-1,2-fucosyltransferase | COO09_23910 | Not Available | - | 4997084 - 4998214 | 42613.0 |
| glycosyl transferase family 1 | COO09_23915 | Not Available | - | 4999400 - 5000623 | 45599.6 |
| hypothetical protein | COO09_23920 | Not Available | - | 5000708 - 5001580 | 32319.7 |
| o-antigen ligase domain-containing protein | COO09_23925 | Not Available | - | 5001627 - 5003045 | 51100.4 |
| hypothetical protein | COO09_23930 | Not Available | - | 5003042 - 5003650 | 22316.9 |
| hypothetical protein | COO09_23935 | Not Available | - | 5003736 - 5005985 | 81340.8 |
| hypothetical protein | COO09_23940 | Not Available | - | 5006010 - 5006300 | 10600.7 |
| transglutaminase | COO09_23945 | Not Available | - | 5007001 - 5008917 | 70156.1 |
| o-succinylhomoserine sulfhydrylase | COO09_23950 | Not Available | + | 5009461 - 5010672 | 43196.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.