Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative toxin-antitoxin system toxin component, pin family | COO09_23380 | Not Available | + | 4875909 - 4876328 | 15655.1 |
| toxin-antitoxin system hicb family antitoxin | COO09_23385 | Not Available | + | 4876331 - 4876609 | 9957.98 |
| histidine phosphatase family protein | COO09_23390 | Not Available | + | 4876615 - 4877235 | 22304.2 |
| integrase | COO09_23395 | Not Available | - | 4877232 - 4878194 | 35226.5 |
| copg family transcriptional regulator | COO09_23400 | Not Available | - | 4878191 - 4878568 | 14314.8 |
| tetr/acrr family transcriptional regulator | COO09_23405 | Not Available | + | 4878799 - 4879026 | 8305.72 |
| tetr/acrr family transcriptional regulator | COO09_23410 | Not Available | - | 4879023 - 4879631 | 22094.9 |
| multidrug transporter | COO09_23415 | Not Available | + | 4879788 - 4881170 | 47925.7 |
| emra/emrk family multidrug efflux transporter periplasmic adaptor subunit | COO09_23420 | Not Available | + | 4881184 - 4882350 | 41303.4 |
| mfs transporter | COO09_23425 | Not Available | + | 4882369 - 4883919 | 54333.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.