Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome p450 | COO09_23275 | Not Available | + | 4856797 - 4857996 | 44506.5 |
| cyclase | COO09_23280 | Not Available | + | 4858123 - 4858920 | 29648.3 |
| cupin domain-containing protein | COO09_23285 | Not Available | + | 4859003 - 4859353 | 12322.8 |
| nad(p)-dependent oxidoreductase | COO09_23290 | Not Available | + | 4859350 - 4860150 | 27197.5 |
| 3-hydroxyacyl-coa dehydrogenase | COO09_23295 | Not Available | + | 4860154 - 4861077 | 32960.0 |
| mfs transporter | COO09_23300 | Not Available | + | 4861067 - 4862293 | 43204.9 |
| 3-keto-5-aminohexanoate cleavage protein | COO09_23305 | Not Available | + | 4862290 - 4863216 | 33861.6 |
| ferredoxin | COO09_23310 | Not Available | + | 4863302 - 4863619 | 11376.5 |
| hypothetical protein | COO09_23315 | Not Available | - | 4863932 - 4864363 | 16191.0 |
| wgr domain-containing protein | COO09_23325 | Not Available | - | 4865481 - 4865777 | 10750.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.