Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glucose-methanol-choline oxidoreductase | COO09_23125 | Not Available | - | 4820183 - 4821817 | 58375.0 |
| aldehyde dehydrogenase | COO09_23130 | Not Available | - | 4821894 - 4823405 | 54385.1 |
| hypothetical protein | COO09_23135 | Not Available | - | 4823431 - 4825650 | 79599.3 |
| hypothetical protein | COO09_23140 | Not Available | + | 4825966 - 4827012 | 38830.9 |
| rnd transporter | COO09_23145 | Not Available | - | 4827029 - 4828441 | 50614.9 |
| abc transporter permease | COO09_23150 | Not Available | - | 4828446 - 4829567 | 40585.2 |
| abc transporter permease | COO09_23155 | Not Available | - | 4829567 - 4830694 | 40815.8 |
| abc transporter atp-binding protein | COO09_23160 | Not Available | - | 4830691 - 4832418 | 61945.5 |
| secretion protein hlyd | COO09_23165 | Not Available | - | 4832420 - 4833427 | 35978.9 |
| duf1956 domain-containing protein | COO09_23170 | Not Available | - | 4833442 - 4834089 | 23320.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.