Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| autoinducer synthase | COO09_23075 | Not Available | - | 4808585 - 4809202 | 22354.1 |
| duf2285 domain-containing protein | COO09_23080 | Not Available | - | 4809324 - 4809560 | 8803.28 |
| transcriptional regulator | COO09_23085 | Not Available | + | 4809659 - 4809886 | 8468.01 |
| luxr family transcriptional regulator | COO09_23090 | Not Available | - | 4809858 - 4810691 | 31325.3 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | COO09_23095 | Not Available | - | 4811378 - 4812274 | 31038.0 |
| tonb-dependent receptor | COO09_23100 | Not Available | - | 4812512 - 4814803 | 81955.8 |
| 5,10-methylenetetrahydrofolate reductase | COO09_23105 | Not Available | - | 4815187 - 4816026 | 29844.1 |
| formyltetrahydrofolate deformylase | COO09_23110 | Not Available | - | 4816137 - 4817000 | 32573.0 |
| glycine cleavage system protein t | COO09_23115 | Not Available | - | 4817163 - 4818590 | 53151.0 |
| mfs transporter | COO09_23120 | Not Available | - | 4818658 - 4820142 | 51347.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.