Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rnd transporter | COO09_23020 | Not Available | + | 4796710 - 4798197 | 52598.4 |
| tn3 family transposase | COO09_23025 | Not Available | - | 4798718 - 4801684 | 108477.0 |
| atp-binding protein | COO09_23030 | Not Available | - | 4801837 - 4802715 | 32235.3 |
| duf1738 domain-containing protein | COO09_23040 | Not Available | - | 4803453 - 4804232 | 28283.4 |
| hypothetical protein | COO09_23045 | Not Available | - | 4804524 - 4804961 | 15641.6 |
| nucleotidyltransferase | COO09_23050 | Not Available | - | 4805098 - 4806186 | 41100.1 |
| lytic transglycosylase | COO09_23055 | Not Available | - | 4806214 - 4806813 | 21305.8 |
| s26 family signal peptidase | COO09_23060 | Not Available | - | 4806825 - 4807439 | 21799.4 |
| dna-binding protein | COO09_23065 | Not Available | - | 4807381 - 4807608 | 8800.29 |
| phytanoyl-coa dioxygenase | COO09_23070 | Not Available | - | 4807680 - 4808588 | 33153.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.