Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methylase | COO09_22915 | Not Available | - | 4770216 - 4774439 | 154351.0 |
| virulence-associated protein e | COO09_22920 | Not Available | - | 4774515 - 4775360 | 30948.5 |
| hypothetical protein | COO09_22925 | Not Available | - | 4775525 - 4776829 | 48837.4 |
| chromosome partitioning protein | COO09_22930 | Not Available | + | 4777372 - 4778574 | 44497.5 |
| chromosome partitioning protein parb | COO09_22935 | Not Available | + | 4778834 - 4779817 | 37253.0 |
| hypothetical protein | COO09_22940 | Not Available | - | 4779864 - 4780814 | 33970.2 |
| integrase | COO09_22945 | Not Available | + | 4780976 - 4782214 | 44686.7 |
| class i sam-dependent methyltransferase | COO09_22955 | Not Available | - | 4782959 - 4783699 | 28140.0 |
| alpha/beta hydrolase | COO09_22960 | Not Available | - | 4783884 - 4784756 | 31186.1 |
| mce family protein | COO09_22965 | Not Available | - | 4784972 - 4785913 | 33816.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.