Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| elongation factor 3 | COO09_02205 | Not Available | - | 470913 - 472688 | 65514.5 |
| hypothetical protein | COO09_02210 | Not Available | + | 472861 - 473085 | 8399.95 |
| dna-binding response regulator | COO09_02215 | Not Available | + | 473105 - 473767 | 24322.8 |
| histidine kinase | COO09_02220 | Not Available | + | 473754 - 475184 | 52441.1 |
| hypothetical protein | COO09_02225 | Not Available | + | 475305 - 477020 | 58362.1 |
| duf815 domain-containing protein | COO09_02230 | Not Available | - | 477022 - 477846 | 29481.2 |
| pep-cterm-box response regulator transcription factor | COO09_02235 | Not Available | - | 477976 - 479328 | 49118.1 |
| pep-cterm system histidine kinase prsk | COO09_02240 | Not Available | - | 479325 - 481451 | 77187.3 |
| sugar transferase | COO09_02245 | Not Available | - | 481490 - 482878 | 51432.6 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | COO09_02250 | Not Available | + | 482974 - 484059 | 38487.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.