Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | COO09_22855 | Not Available | - | 4758871 - 4759617 | 27235.7 |
| transcriptional regulator | COO09_22860 | Not Available | - | 4759631 - 4760392 | 28478.9 |
| hypothetical protein | COO09_22865 | Not Available | + | 4760614 - 4761183 | 20591.9 |
| isoprenylcysteine carboxylmethyltransferase family protein | COO09_22870 | Not Available | - | 4761118 - 4761972 | 32211.4 |
| duf2933 domain-containing protein | COO09_22875 | Not Available | - | 4761969 - 4762232 | 9646.93 |
| mbl fold metallo-hydrolase | COO09_22880 | Not Available | + | 4762518 - 4763933 | 51274.4 |
| thymidine phosphorylase | COO09_22885 | Not Available | + | 4763930 - 4765468 | 52941.8 |
| phosphoribosylpyrophosphate synthetase | COO09_22890 | Not Available | + | 4765465 - 4766373 | 33188.8 |
| hypothetical protein | COO09_22905 | Not Available | - | 4767154 - 4767903 | 28053.9 |
| chromosome partitioning protein parb | COO09_22910 | Not Available | - | 4768005 - 4770110 | 76223.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.