Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | COO09_22645 | Not Available | - | 4717830 - 4718966 | 41806.5 |
| 3-hydroxyacyl-coa dehydrogenase | COO09_22650 | Not Available | + | 4719160 - 4720071 | 32214.3 |
| 3-hydroxy-3-methylglutaryl coa synthase | COO09_22655 | Not Available | + | 4720121 - 4721599 | 52328.6 |
| acetyl-coa acetyltransferase | COO09_22660 | Not Available | + | 4721599 - 4722804 | 42160.6 |
| iclr family transcriptional regulator | COO09_22665 | Not Available | - | 4722940 - 4723731 | 28255.0 |
| alcohol dehydrogenase | COO09_22670 | Not Available | - | 4723945 - 4725030 | 38718.4 |
| coa transferase | COO09_22675 | Not Available | - | 4725071 - 4727494 | 84963.1 |
| lysr family transcriptional regulator | COO09_22680 | Not Available | + | 4727620 - 4728543 | 34146.8 |
| group ii intron reverse transcriptase/maturase | COO09_22685 | Not Available | - | 4729100 - 4730965 | 70348.4 |
| hypothetical protein | COO09_22690 | Not Available | + | 4731692 - 4731919 | 7887.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.