Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | COO09_22595 | Not Available | + | 4705269 - 4706078 | 28946.8 |
| 3-oxoacyl-acp reductase | COO09_22600 | Not Available | - | 4706147 - 4706923 | 26872.1 |
| hypothetical protein | COO09_22605 | Not Available | - | 4706991 - 4707224 | 8143.84 |
| hypothetical protein | COO09_22610 | Not Available | - | 4707412 - 4708251 | 29907.7 |
| carboxylate transporter | COO09_22615 | Not Available | + | 4708354 - 4709664 | 45396.2 |
| duf4118 domain-containing protein | COO09_22620 | Not Available | + | 4709905 - 4711188 | 45889.4 |
| tonb-dependent receptor | COO09_22625 | Not Available | + | 4712091 - 4714271 | 78565.8 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | COO09_22630 | Not Available | - | 4714367 - 4715146 | 27799.4 |
| nitronate monooxygenase | COO09_22635 | Not Available | - | 4715251 - 4716264 | 35749.1 |
| mfs transporter | COO09_22640 | Not Available | - | 4716395 - 4717759 | 47436.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.