Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein virb5 | COO09_22430 | Not Available | - | 4673505 - 4674218 | 25464.1 |
| virb4 family type iv secretion/conjugal transfer atpase | COO09_22435 | Not Available | - | 4674232 - 4676616 | 89883.6 |
| type vi secretion protein | COO09_22440 | Not Available | - | 4676603 - 4676947 | 12305.2 |
| hypothetical protein | COO09_22445 | Not Available | - | 4676954 - 4677295 | 12135.5 |
| hypothetical protein | COO09_22450 | Not Available | - | 4677317 - 4677982 | 23252.5 |
| hypothetical protein | COO09_22455 | Not Available | - | 4677997 - 4678338 | 12106.5 |
| hypothetical protein | COO09_22460 | Not Available | - | 4678380 - 4678688 | 11915.2 |
| ribbon-helix-helix protein, copg family | COO09_22465 | Not Available | + | 4678849 - 4679112 | 10012.0 |
| replication initiation protein | COO09_22470 | Not Available | + | 4679401 - 4680183 | 29541.6 |
| dna primase | COO09_22475 | Not Available | + | 4680295 - 4681176 | 32355.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.