Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tade family protein | COO09_02155 | Not Available | - | 459557 - 459964 | 14130.1 |
| hypothetical protein | COO09_02160 | Not Available | - | 459961 - 460470 | 17580.3 |
| hypothetical protein | COO09_02165 | Not Available | - | 460467 - 462362 | 62462.5 |
| abc transporter atp-binding protein | COO09_02170 | Not Available | - | 462427 - 463101 | 24090.0 |
| lipoprotein-releasing system transmembrane subunit, lolc/lole family | COO09_02175 | Not Available | - | 463094 - 464344 | 45097.1 |
| proline--trna ligase | COO09_02180 | Not Available | - | 464474 - 465799 | 49700.5 |
| oxidoreductase | COO09_02185 | Not Available | - | 466422 - 466721 | 10776.7 |
| atp-dependent helicase hrpb | COO09_02190 | Not Available | - | 466781 - 469240 | 87107.2 |
| farnesyltranstransferase | COO09_02195 | Not Available | - | 469371 - 470396 | 36633.1 |
| chorismate mutase | COO09_02200 | Not Available | + | 470547 - 470831 | 10628.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.