Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein | COO09_22320 | Not Available | + | 4657579 - 4658421 | 29282.5 |
| hypothetical protein | COO09_22325 | Not Available | + | 4658576 - 4658770 | 7058.54 |
| cold-shock protein | COO09_22330 | Not Available | + | 4658789 - 4659022 | 8827.56 |
| hypothetical protein | COO09_22335 | Not Available | - | 4659394 - 4659573 | 6339.67 |
| xre family transcriptional regulator | COO09_22340 | Not Available | - | 4659687 - 4659944 | 9096.95 |
| rna polymerase subunit sigma | COO09_22345 | Not Available | + | 4660070 - 4660828 | 27892.4 |
| resolvase | COO09_22350 | Not Available | + | 4660818 - 4661510 | 25236.3 |
| single-stranded dna-binding protein | COO09_22355 | Not Available | + | 4661904 - 4662218 | 11608.5 |
| transcriptional regulator | COO09_22360 | Not Available | + | 4662327 - 4662578 | 9066.96 |
| hypothetical protein | COO09_22365 | Not Available | + | 4662645 - 4662935 | 10519.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.