Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | COO09_22105 | Not Available | - | 4611449 - 4611832 | 14268.0 |
| malate synthase g | COO09_22110 | Not Available | - | 4611836 - 4613974 | 76961.4 |
| glcg protein | COO09_22115 | Not Available | - | 4613988 - 4614416 | 13519.4 |
| duf427 domain-containing protein | COO09_22120 | Not Available | - | 4614501 - 4614884 | 13916.7 |
| mfs transporter | COO09_22125 | Not Available | - | 4614914 - 4616248 | 47701.7 |
| hypothetical protein | COO09_22130 | Not Available | - | 4616245 - 4617957 | 61442.0 |
| taud/tfda family dioxygenase | COO09_22135 | Not Available | - | 4617884 - 4618840 | 36208.3 |
| tonb-dependent receptor | COO09_22140 | Not Available | - | 4618873 - 4621338 | 87851.7 |
| iclr family transcriptional regulator | COO09_22145 | Not Available | - | 4621469 - 4622239 | 27233.9 |
| nuclear transport factor 2 family protein | COO09_22150 | Not Available | + | 4622550 - 4623104 | 20553.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.