Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tn3 family transposase | COO09_22000 | Not Available | - | 4588696 - 4591665 | 109421.0 |
| mercury(ii) reductase | COO09_22005 | Not Available | - | 4591757 - 4593133 | 47250.3 |
| heavy metal transporter | COO09_22010 | Not Available | - | 4593213 - 4593542 | 11000.3 |
| mercury transporter mert | COO09_22015 | Not Available | - | 4593555 - 4593950 | 14090.2 |
| transcriptional regulator | COO09_22020 | Not Available | + | 4594027 - 4594449 | 15746.1 |
| transposase | COO09_22025 | Not Available | + | 4594620 - 4595180 | 21138.4 |
| transposon dna-invertase | COO09_22035 | Not Available | + | 4597641 - 4598261 | 22435.1 |
| n-acetyltransferase | COO09_22040 | Not Available | + | 4598258 - 4598788 | 19476.1 |
| type ii restriction endonuclease | COO09_22045 | Not Available | - | 4598855 - 4600150 | 47502.6 |
| copper-binding protein | COO09_22050 | Not Available | - | 4600399 - 4600803 | 13721.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.