Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | COO09_21890 | Not Available | - | 4564238 - 4566472 | 79655.7 |
| hypothetical protein | COO09_21895 | Not Available | - | 4566551 - 4567243 | 25332.9 |
| tonb-dependent receptor | COO09_21900 | Not Available | + | 4567596 - 4568068 | 16451.3 |
| is110 family transposase | COO09_21905 | Not Available | + | 4568225 - 4569517 | 48681.7 |
| transposon dna-invertase | COO09_21915 | Not Available | + | 4570618 - 4571190 | 20864.5 |
| hypothetical protein | COO09_21920 | Not Available | + | 4571480 - 4572682 | 41993.1 |
| transcriptional regulator | COO09_21925 | Not Available | - | 4572676 - 4573095 | 15335.6 |
| cation transporter | COO09_21930 | Not Available | + | 4573171 - 4573797 | 21560.2 |
| iron permease | COO09_21935 | Not Available | + | 4573797 - 4575764 | 69517.3 |
| hypothetical protein | COO09_21940 | Not Available | + | 4575838 - 4576134 | 10227.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.