Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lactoylglutathione lyase | COO09_21790 | Not Available | - | 4543242 - 4543709 | 17211.5 |
| 3-hydroxyacyl-coa dehydrogenase | COO09_21795 | Not Available | - | 4543721 - 4544638 | 31915.8 |
| enoyl-coa hydratase | COO09_21800 | Not Available | + | 4544859 - 4545647 | 28129.2 |
| class ii aldolase | COO09_21805 | Not Available | + | 4545755 - 4546519 | 28238.9 |
| hypothetical protein | COO09_21810 | Not Available | + | 4546567 - 4547073 | 18260.4 |
| hypothetical protein | COO09_21815 | Not Available | + | 4547088 - 4547513 | 15685.6 |
| 3-oxoacyl-acp reductase | COO09_21820 | Not Available | - | 4547510 - 4548301 | 27892.4 |
| nuclear transport factor 2 family protein | COO09_21825 | Not Available | + | 4548452 - 4549168 | 27099.3 |
| tonb-dependent receptor | COO09_21830 | Not Available | + | 4549283 - 4551703 | 87819.1 |
| cytochrome p450 | COO09_21835 | Not Available | + | 4551713 - 4552918 | 44298.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.