Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phytanoyl-coa dioxygenase | COO09_21690 | Not Available | - | 4520885 - 4521745 | 31046.6 |
| autoinducer synthase | COO09_21695 | Not Available | - | 4521742 - 4522344 | 22144.9 |
| luxr family transcriptional regulator | COO09_21700 | Not Available | - | 4522398 - 4523165 | 27942.7 |
| coa transferase subunit b | COO09_21705 | Not Available | - | 4523271 - 4523906 | 22832.7 |
| coa transferase subunit a | COO09_21710 | Not Available | - | 4523908 - 4524612 | 25523.8 |
| amidohydrolase | COO09_21715 | Not Available | - | 4524652 - 4525977 | 46242.8 |
| delta 4, 5-alpha steroid dehydrogenase | COO09_21720 | Not Available | - | 4525974 - 4527749 | 63201.3 |
| duf4387 domain-containing protein | COO09_21725 | Not Available | - | 4527662 - 4527985 | 11843.2 |
| acyclic terpene utilization atua family protein | COO09_21730 | Not Available | - | 4527982 - 4529379 | 49652.6 |
| hypothetical protein | COO09_21735 | Not Available | + | 4529487 - 4530701 | 45637.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.