Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| urca family protein | COO09_21635 | Not Available | + | 4507320 - 4507985 | 23158.1 |
| urca family protein | COO09_21640 | Not Available | + | 4508526 - 4508870 | 11771.2 |
| trehalose-phosphatase | COO09_21645 | Not Available | + | 4509106 - 4509861 | 26899.6 |
| glycoside hydrolase family 15 protein | COO09_21650 | Not Available | + | 4509858 - 4511654 | 67610.0 |
| trehalose-6-phosphate synthase | COO09_21655 | Not Available | + | 4511636 - 4513042 | 52863.5 |
| class i sam-dependent methyltransferase | COO09_21660 | Not Available | - | 4513052 - 4514020 | 36025.8 |
| recombinase family protein | COO09_21670 | Not Available | + | 4515023 - 4516669 | 61185.1 |
| hypothetical protein | COO09_21675 | Not Available | + | 4516677 - 4519358 | 101460.0 |
| hypothetical protein | COO09_21680 | Not Available | + | 4519422 - 4519931 | 19377.2 |
| duf2285 domain-containing protein | COO09_21685 | Not Available | - | 4520140 - 4520739 | 21835.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.