Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | COO09_21535 | Not Available | - | 4483766 - 4484524 | 27806.6 |
| acyl-coa dehydrogenase | COO09_21540 | Not Available | - | 4484557 - 4485684 | 39609.2 |
| acyl-coa dehydrogenase | COO09_21545 | Not Available | - | 4485695 - 4486894 | 44785.4 |
| short-chain dehydrogenase | COO09_21550 | Not Available | + | 4487047 - 4487805 | 27361.7 |
| choline dehydrogenase | COO09_21555 | Not Available | - | 4487868 - 4489544 | 60193.9 |
| 3-oxoacyl-acp reductase | COO09_21560 | Not Available | + | 4489713 - 4490513 | 27890.5 |
| sulfatase | COO09_21565 | Not Available | + | 4490521 - 4492863 | 84765.2 |
| aldehyde dehydrogenase | COO09_21570 | Not Available | + | 4492863 - 4494338 | 51840.1 |
| mfs transporter | COO09_21575 | Not Available | + | 4494335 - 4495720 | 48492.2 |
| amp-dependent synthetase | COO09_21580 | Not Available | + | 4495717 - 4497285 | 56114.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.