Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| succinyl-diaminopimelate desuccinylase | COO09_21325 | Not Available | + | 4428459 - 4429601 | 39686.4 |
| Trna-leu | Not Available | Not Available | + | 4429784 - 4429870 | Not Available |
| hypothetical protein | COO09_21335 | Not Available | + | 4430233 - 4432398 | 76740.2 |
| hypothetical protein | COO09_21340 | Not Available | + | 4432395 - 4433123 | 26577.5 |
| gscfa domain-containing protein | COO09_21345 | Not Available | + | 4433120 - 4434196 | 38805.8 |
| sam-dependent methyltransferase | COO09_21350 | Not Available | - | 4434213 - 4435181 | 35344.6 |
| sulfotransferase family protein | COO09_21355 | Not Available | + | 4435291 - 4436463 | 42378.6 |
| glycosyl transferase | COO09_21360 | Not Available | + | 4436460 - 4440365 | 141453.0 |
| m23 family peptidase | COO09_21365 | Not Available | + | 4440322 - 4441383 | 36854.3 |
| group 1 glycosyl transferase | COO09_21370 | Not Available | + | 4441453 - 4442688 | 45427.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.