Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | COO09_21270 | Not Available | + | 4420067 - 4420936 | 32364.4 |
| hypothetical protein | COO09_21275 | Not Available | + | 4421167 - 4421976 | 29915.3 |
| duf3251 domain-containing protein | COO09_21285 | Not Available | - | 4423295 - 4423792 | 17457.2 |
| 50s ribosomal protein l34 | COO09_21290 | Not Available | + | 4424012 - 4424146 | 5048.29 |
| ribonuclease p protein component | COO09_21295 | Not Available | + | 4424164 - 4424508 | 12549.6 |
| membrane protein insertion efficiency factor yidd | COO09_21300 | Not Available | + | 4424505 - 4424717 | 7746.72 |
| membrane protein insertase yidc | COO09_21305 | Not Available | + | 4424745 - 4426487 | 63950.1 |
| yiha family ribosome biogenesis gtp-binding protein | COO09_21310 | Not Available | + | 4426484 - 4427146 | 24176.2 |
| glutathione s-transferase | COO09_21315 | Not Available | + | 4427293 - 4427961 | 24979.9 |
| transcriptional regulator | COO09_21320 | Not Available | - | 4427958 - 4428407 | 16433.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.