Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chromosome partitioning protein parb | COO09_21220 | Not Available | - | 4412294 - 4413883 | 56570.8 |
| hypothetical protein | COO09_21225 | Not Available | - | 4414011 - 4415024 | 37595.7 |
| hypothetical protein | COO09_21230 | Not Available | + | 4415112 - 4415600 | 18187.7 |
| nuclease | COO09_21235 | Not Available | - | 4415604 - 4416098 | 17516.7 |
| hypothetical protein | COO09_21240 | Not Available | - | 4416104 - 4416304 | 7433.96 |
| hypothetical protein | COO09_21245 | Not Available | - | 4416347 - 4416955 | 23039.7 |
| hypothetical protein | COO09_21250 | Not Available | - | 4416999 - 4417283 | 10058.8 |
| xre family transcriptional regulator | COO09_21255 | Not Available | + | 4417389 - 4417646 | 9550.69 |
| hnh endonuclease | COO09_21260 | Not Available | - | 4418275 - 4419546 | 46399.6 |
| hypothetical protein | COO09_21265 | Not Available | + | 4419746 - 4420060 | 11074.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.