Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase | COO09_20700 | Not Available | - | 4309188 - 4310198 | 37793.7 |
| glutathione s-transferase family protein | COO09_20705 | Not Available | - | 4310315 - 4311199 | 33022.9 |
| alpha/beta hydrolase | COO09_20710 | Not Available | - | 4311114 - 4312274 | 43197.2 |
| hypothetical protein | COO09_20715 | Not Available | + | 4312557 - 4313801 | 45379.6 |
| integrase | COO09_20720 | Not Available | + | 4313801 - 4315012 | 43596.6 |
| metal/formaldehyde-sensitive transcriptional repressor | COO09_20725 | Not Available | + | 4315115 - 4315390 | 9752.74 |
| cation transporter | COO09_20730 | Not Available | + | 4315401 - 4316324 | 32715.5 |
| duf1289 domain-containing protein | COO09_20735 | Not Available | + | 4316335 - 4316499 | 6087.18 |
| hypothetical protein | COO09_20745 | Not Available | + | 4319156 - 4319344 | 6443.16 |
| hypothetical protein | COO09_20750 | Not Available | + | 4319834 - 4320043 | 7824.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.