Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter subunit c | COO09_20595 | Not Available | - | 4286545 - 4286886 | 11822.7 |
| monovalent cation/h+ antiporter subunit a | COO09_20600 | Not Available | - | 4286886 - 4289816 | 104460.0 |
| hypothetical protein | COO09_20605 | Not Available | + | 4290027 - 4290434 | 15005.0 |
| hypothetical protein | COO09_20610 | Not Available | - | 4290594 - 4291085 | 17373.7 |
| dna-binding protein | COO09_20620 | Not Available | - | 4292673 - 4292900 | 8283.81 |
| duf2274 domain-containing protein | COO09_20625 | Not Available | - | 4292910 - 4293146 | 8775.68 |
| conjugal transfer protein trbi | COO09_20630 | Not Available | - | 4293143 - 4294297 | 39861.8 |
| p-type conjugative transfer protein trbg | COO09_20635 | Not Available | - | 4294315 - 4295142 | 29478.3 |
| conjugal transfer protein trbf | COO09_20640 | Not Available | - | 4295139 - 4295939 | 29166.7 |
| p-type conjugative transfer protein trbl | COO09_20645 | Not Available | - | 4295941 - 4297239 | 43927.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.