Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cyclohexanecarboxylate-coa ligase | COO09_20545 | Not Available | + | 4277387 - 4279162 | 65012.4 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | COO09_20550 | Not Available | + | 4279162 - 4279959 | 29018.6 |
| lysr family transcriptional regulator | COO09_20555 | Not Available | - | 4280110 - 4280976 | 30703.3 |
| bile acid:sodium symporter | COO09_20560 | Not Available | + | 4281059 - 4282039 | 34906.4 |
| nitroreductase | COO09_20565 | Not Available | - | 4282106 - 4282741 | 22490.8 |
| tetr/acrr family transcriptional regulator | COO09_20570 | Not Available | + | 4283157 - 4283795 | 24400.8 |
| cation:proton antiporter | COO09_20575 | Not Available | - | 4283834 - 4284175 | 12165.2 |
| k+/h+ antiporter subunit f | COO09_20580 | Not Available | - | 4284172 - 4284453 | 9835.52 |
| na+/h+ antiporter subunit e | COO09_20585 | Not Available | - | 4284450 - 4284932 | 18058.9 |
| monovalent cation/h+ antiporter subunit d | COO09_20590 | Not Available | - | 4284929 - 4286548 | 56991.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.