Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-aspartate oxidase | COO09_20340 | Not Available | - | 4239170 - 4240768 | 58408.4 |
| abc transporter atp-binding protein | COO09_20345 | Not Available | - | 4240761 - 4241684 | 33347.0 |
| hypothetical protein | COO09_20350 | Not Available | - | 4241733 - 4242212 | 17913.1 |
| m23 family peptidase | COO09_20355 | Not Available | - | 4242359 - 4243204 | 31756.2 |
| hypothetical protein | COO09_20360 | Not Available | - | 4243201 - 4243575 | 13867.6 |
| hypothetical protein | COO09_20365 | Not Available | + | 4243610 - 4243948 | 11407.8 |
| zinc-finger domain-containing protein | COO09_20370 | Not Available | + | 4244094 - 4244300 | 7004.13 |
| metalloprotease tldd | COO09_20375 | Not Available | + | 4244475 - 4245905 | 50408.8 |
| patatin | COO09_20380 | Not Available | + | 4246071 - 4246907 | 29821.8 |
| duf924 domain-containing protein | COO09_20385 | Not Available | + | 4246901 - 4247452 | 20838.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.