Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydroxymethylbilane synthase | COO09_20290 | Not Available | - | 4230052 - 4230981 | 32411.3 |
| mate family efflux transporter | COO09_20295 | Not Available | - | 4231006 - 4232388 | 49058.5 |
| hypothetical protein | COO09_20300 | Not Available | - | 4232436 - 4233524 | 39829.0 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | COO09_20305 | Not Available | + | 4233614 - 4234651 | 35308.6 |
| nad(p)-dependent glycerol-3-phosphate dehydrogenase | COO09_20310 | Not Available | + | 4234648 - 4235643 | 33385.4 |
| outer membrane protein assembly factor bame | COO09_20315 | Not Available | - | 4235747 - 4236229 | 17076.3 |
| ubiquinol-cytochrome c chaperone | COO09_20320 | Not Available | + | 4236373 - 4236894 | 18516.7 |
| hypothetical protein | COO09_20325 | Not Available | + | 4236891 - 4237412 | 17953.2 |
| na+/h+ antiporter nhaa | COO09_20330 | Not Available | - | 4237428 - 4238576 | 38979.8 |
| hypothetical protein | COO09_20335 | Not Available | + | 4238705 - 4239160 | 17291.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.