Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iv | COO09_20240 | Not Available | + | 4220472 - 4221626 | 41659.5 |
| dsba family oxidoreductase | COO09_20245 | Not Available | + | 4221673 - 4222335 | 24330.7 |
| amino acid-binding protein | COO09_20250 | Not Available | - | 4222611 - 4223138 | 18282.8 |
| heparinase | COO09_20255 | Not Available | - | 4223210 - 4224937 | 62382.4 |
| ribulose-phosphate 3-epimerase | COO09_20260 | Not Available | - | 4224948 - 4225610 | 23175.1 |
| sam-dependent methyltransferase | COO09_20265 | Not Available | - | 4225816 - 4227096 | 45163.0 |
| zinc metalloprotease htpx | COO09_20270 | Not Available | - | 4227165 - 4228115 | 33267.7 |
| duf1674 domain-containing protein | COO09_20275 | Not Available | + | 4228197 - 4228367 | 6040.13 |
| hypothetical protein | COO09_20280 | Not Available | - | 4228473 - 4229330 | 30824.3 |
| uroporphyrinogen-iii synthase | COO09_20285 | Not Available | - | 4229366 - 4230055 | 24242.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.