Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acyltransferase | COO09_20140 | Not Available | - | 4202928 - 4204109 | 40430.4 |
| lysr family transcriptional regulator | COO09_20145 | Not Available | - | 4204266 - 4205156 | 32987.9 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | COO09_20150 | Not Available | + | 4205254 - 4206366 | 39488.6 |
| voc family protein | COO09_20155 | Not Available | + | 4206390 - 4206782 | 12854.2 |
| s-formylglutathione hydrolase | COO09_20160 | Not Available | + | 4206904 - 4207746 | 30359.0 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | COO09_20165 | Not Available | - | 4207778 - 4209883 | 78525.2 |
| dna-directed rna polymerase subunit omega | COO09_20170 | Not Available | - | 4210092 - 4210433 | 12248.3 |
| methyltransferase | COO09_20175 | Not Available | - | 4210526 - 4211155 | 22983.6 |
| lysr family transcriptional regulator | COO09_20180 | Not Available | + | 4211532 - 4212416 | 32909.8 |
| alkyl hydroperoxide reductase | COO09_20185 | Not Available | - | 4212642 - 4213163 | 18302.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.