Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | COO09_20090 | Not Available | - | 4191614 - 4192483 | 29946.8 |
| threonine ammonia-lyase | COO09_20095 | Not Available | + | 4192557 - 4193804 | 44310.9 |
| arginyltransferase | COO09_20100 | Not Available | + | 4193936 - 4194739 | 29818.6 |
| sorbosone dehydrogenase | COO09_20105 | Not Available | - | 4194783 - 4196129 | 47683.3 |
| hlyc/corc family transporter | COO09_20110 | Not Available | - | 4196236 - 4197132 | 32795.2 |
| cadherin domain-containing protein | COO09_20115 | Not Available | - | 4197209 - 4198687 | 50283.1 |
| hypothetical protein | COO09_20120 | Not Available | - | 4198812 - 4199378 | 20371.7 |
| rrna maturation rnase ybey | COO09_20125 | Not Available | - | 4199381 - 4199890 | 18525.6 |
| phoh family protein | COO09_20130 | Not Available | - | 4199982 - 4200980 | 36242.9 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | COO09_20135 | Not Available | - | 4201167 - 4202516 | 48044.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.