Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | COO09_19990 | Not Available | - | 4170970 - 4171713 | 26448.7 |
| Trna-tyr | Not Available | Not Available | + | 4171839 - 4171924 | Not Available |
| hypothetical protein | COO09_20000 | Not Available | - | 4171931 - 4172689 | 27829.5 |
| cytochrome c | COO09_20005 | Not Available | - | 4172706 - 4173071 | 12771.7 |
| integration host factor subunit beta | COO09_20010 | Not Available | + | 4173333 - 4173611 | 10324.6 |
| sugar transporter | COO09_20015 | Not Available | + | 4174271 - 4174891 | 21593.1 |
| hypothetical protein | COO09_20020 | Not Available | + | 4174888 - 4176063 | 42004.2 |
| lipopolysaccharide biosynthesis protein | COO09_20025 | Not Available | + | 4176063 - 4177529 | 52006.5 |
| chromosome partitioning protein | COO09_20030 | Not Available | + | 4177526 - 4178311 | 28753.3 |
| phosphatase pap2 family protein | COO09_20035 | Not Available | + | 4178352 - 4179140 | 27827.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.