Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylpyrophosphate synthetase | COO09_19935 | Not Available | + | 4159880 - 4160815 | 33189.9 |
| histidinol-phosphatase | COO09_19940 | Not Available | + | 4160971 - 4161738 | 27209.2 |
| asma family protein | COO09_19950 | Not Available | - | 4162601 - 4164742 | 77770.8 |
| 50s ribosomal protein l35 | COO09_19955 | Not Available | + | 4164909 - 4165112 | 7498.32 |
| 50s ribosomal protein l20 | COO09_19960 | Not Available | + | 4165126 - 4165503 | 13779.0 |
| endonuclease | COO09_19965 | Not Available | + | 4165849 - 4166160 | 11837.3 |
| phenylalanine--trna ligase subunit alpha | COO09_19970 | Not Available | + | 4166177 - 4167277 | 39932.6 |
| phenylalanine--trna ligase subunit beta | COO09_19975 | Not Available | + | 4167274 - 4169649 | 83852.7 |
| dna-3-methyladenine glycosylase 2 family protein | COO09_19980 | Not Available | - | 4169652 - 4170296 | 23074.8 |
| ferredoxin | COO09_19985 | Not Available | + | 4170377 - 4170694 | 11301.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.