Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome p450 | COO09_19785 | Not Available | + | 4134518 - 4135717 | 44931.8 |
| nad(p)-dependent oxidoreductase | COO09_19790 | Not Available | - | 4135748 - 4136551 | 28050.5 |
| enoyl-coa hydratase | COO09_19795 | Not Available | + | 4136720 - 4137616 | 33012.3 |
| enoyl-coa hydratase | COO09_19800 | Not Available | + | 4137519 - 4138418 | 32287.0 |
| mfs transporter | COO09_19805 | Not Available | - | 4138431 - 4139624 | 41399.6 |
| heme abc transporter permease ccmb | COO09_19810 | Not Available | - | 4139732 - 4140379 | 21470.2 |
| heme abc exporter atp-binding protein ccma | COO09_19815 | Not Available | - | 4140376 - 4140960 | 19298.5 |
| neutral zinc metallopeptidase | COO09_19820 | Not Available | - | 4140960 - 4141361 | 14643.4 |
| 4a-hydroxytetrahydrobiopterin dehydratase | COO09_19825 | Not Available | + | 4141415 - 4141708 | 10977.6 |
| hypothetical protein | COO09_19830 | Not Available | - | 4141766 - 4142047 | 9999.78 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.