Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | COO09_19685 | Not Available | + | 4112223 - 4113635 | 54522.2 |
| 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-coa hydratase | COO09_19690 | Not Available | + | 4113639 - 4114478 | 29665.7 |
| arac family transcriptional regulator | COO09_19695 | Not Available | - | 4114450 - 4115385 | 33716.8 |
| rna polymerase sigma factor | COO09_19700 | Not Available | + | 4115480 - 4116109 | 23314.8 |
| 4-hydroxyphenylacetate 3-hydroxylase | COO09_19705 | Not Available | + | 4116189 - 4117595 | 52041.0 |
| acyl-coa dehydrogenase | COO09_19710 | Not Available | + | 4117597 - 4118727 | 41448.0 |
| coa ester lyase | COO09_19715 | Not Available | + | 4118750 - 4119703 | 34893.7 |
| coa transferase | COO09_19720 | Not Available | + | 4119700 - 4120896 | 43171.7 |
| fmn-dependent monooxygenase | COO09_19725 | Not Available | + | 4120911 - 4122248 | 49746.4 |
| coa ester lyase | COO09_19730 | Not Available | + | 4122241 - 4123116 | 30741.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.