Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase iron-sulfur subunit | COO09_19385 | Not Available | + | 4045433 - 4046083 | 22500.8 |
| molybdopterin dehydrogenase | COO09_19390 | Not Available | + | 4046080 - 4047021 | 32950.9 |
| xanthine dehydrogenase | COO09_19395 | Not Available | + | 4047024 - 4049234 | 78520.3 |
| 30s ribosomal protein s12 methylthiotransferase rimo | COO09_19400 | Not Available | - | 4049269 - 4050618 | 48489.1 |
| xre family transcriptional regulator | COO09_19405 | Not Available | + | 4050774 - 4051046 | 9213.19 |
| sulp family inorganic anion transporter | COO09_19410 | Not Available | + | 4051063 - 4052823 | 60383.7 |
| hypothetical protein | COO09_19415 | Not Available | - | 4052820 - 4053980 | 40411.6 |
| 5'/3'-nucleotidase sure | COO09_19420 | Not Available | - | 4054188 - 4054952 | 27200.6 |
| serine--trna ligase | COO09_19425 | Not Available | - | 4054949 - 4056226 | 45869.5 |
| hypothetical protein | COO09_19430 | Not Available | + | 4056527 - 4056973 | 14260.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.