Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methylmalonate-semialdehyde dehydrogenase (coa acylating) | COO09_19335 | Not Available | + | 4033801 - 4035297 | 53029.7 |
| hypothetical protein | COO09_19340 | Not Available | - | 4035343 - 4035588 | 9355.33 |
| acyl-coa dehydrogenase | COO09_19345 | Not Available | + | 4035618 - 4036763 | 41367.4 |
| enoyl-coa hydratase/isomerase family protein | COO09_19350 | Not Available | + | 4036760 - 4037839 | 38058.5 |
| enoyl-coa hydratase | COO09_19355 | Not Available | + | 4037854 - 4038627 | 27489.4 |
| 3-hydroxyisobutyrate dehydrogenase | COO09_19360 | Not Available | + | 4038612 - 4039523 | 30515.6 |
| abc transporter | COO09_19365 | Not Available | - | 4039559 - 4041331 | 62855.6 |
| polyhydroxyalkanoate depolymerase | COO09_19370 | Not Available | + | 4041501 - 4042721 | 45618.9 |
| hypothetical protein | COO09_19375 | Not Available | + | 4042783 - 4044321 | 54989.5 |
| dipeptide epimerase | COO09_19380 | Not Available | + | 4044321 - 4045319 | 34458.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.