Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein | COO09_19135 | Not Available | + | 3994634 - 3995437 | 28712.8 |
| hypothetical protein | COO09_19140 | Not Available | - | 3995986 - 3996438 | 16482.8 |
| response regulator | COO09_19145 | Not Available | - | 3996351 - 3996755 | 14660.6 |
| dna-binding response regulator | COO09_19150 | Not Available | - | 3996833 - 3997447 | 22109.2 |
| pas domain-containing sensor histidine kinase | COO09_19155 | Not Available | - | 3997440 - 3999320 | 68182.5 |
| hypothetical protein | COO09_19160 | Not Available | + | 3999616 - 4000029 | 14876.1 |
| phosphoenolpyruvate synthase | COO09_19165 | Not Available | + | 4000507 - 4002888 | 84422.6 |
| hypothetical protein | COO09_19170 | Not Available | + | 4003173 - 4003763 | 21651.4 |
| atpase | COO09_19175 | Not Available | + | 4003765 - 4005705 | 67780.6 |
| hypothetical protein | COO09_19180 | Not Available | - | 4005779 - 4006120 | 12732.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.