Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | COO09_18885 | Not Available | + | 3942422 - 3943606 | 42807.4 |
| coa transferase | COO09_18890 | Not Available | + | 3943606 - 3944730 | 39334.8 |
| thiamine pyrophosphate-binding protein | COO09_18895 | Not Available | + | 3944890 - 3946566 | 59672.3 |
| glsb/yeaq/ymge family stress response membrane protein | COO09_18900 | Not Available | + | 3946839 - 3947105 | 9090.69 |
| hypothetical protein | COO09_18905 | Not Available | + | 3947279 - 3947509 | 8615.06 |
| padr family transcriptional regulator | COO09_18910 | Not Available | - | 3947651 - 3948178 | 20049.2 |
| dicarboxylate--coa ligase pima | COO09_18915 | Not Available | - | 3948237 - 3949805 | 56570.9 |
| acyl-coa dehydrogenase | COO09_18920 | Not Available | - | 3949817 - 3951424 | 56077.2 |
| nitronate monooxygenase | COO09_18925 | Not Available | + | 3951568 - 3952530 | 33872.7 |
| ferredoxin | COO09_18930 | Not Available | + | 3952664 - 3952927 | 9589.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.