Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| circularly permuted type 2 atp-grasp protein | COO09_01805 | Not Available | - | 379716 - 381176 | 52836.1 |
| lytic transglycosylase | COO09_01810 | Not Available | - | 381327 - 383378 | 75343.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | COO09_01815 | Not Available | + | 383425 - 384300 | 31257.4 |
| ssra-binding protein smpb | COO09_01820 | Not Available | + | 384462 - 384944 | 18740.5 |
| duf2062 domain-containing protein | COO09_01825 | Not Available | + | 384951 - 385532 | 21584.6 |
| peptidase m13 | COO09_01830 | Not Available | + | 385591 - 387618 | 74910.2 |
| hybrid sensor histidine kinase/response regulator | COO09_01835 | Not Available | + | 387796 - 390213 | 86109.4 |
| recombinase reca | COO09_01840 | Not Available | + | 390564 - 391634 | 37888.6 |
| glyoxalase/bleomycin resistance/extradiol dioxygenase family protein | COO09_01845 | Not Available | + | 391734 - 392090 | 12208.2 |
| glutathione s-transferase | COO09_01850 | Not Available | + | 392128 - 392754 | 23451.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.